Assay Guidance Manual eBook
The Assay Guidance Manual (AGM) eBook is a free, best-practices online resource devoted to the successful development of robust, early-stage drug discovery assays.
The manual was adapted from documents developed by the drug discovery industry (Eli Lilly and Company and Sphinx Pharmaceuticals, Inc.) that were designed to collect institutional knowledge and provide step-by-step guidance on planning and creating projects for high-throughput screening, lead optimization, and early phases of regulated drug development. The AGM has now been expanded into a unique, user-friendly collection of over 50 chapters of well-tested knowledge, much of which is being documented for the first time. Methods outlined in the manual address appropriate statistical ways to analyze assay results and accommodate minor changes to assay protocols to ensure robustness.
Investigators worldwide can use the manual to design biologically and pharmacologically relevant assays for high-throughput screening and lead optimization to evaluate collections of molecules that modulate the activity of biological targets, pathways and cellular phenotypes.
Our staff manage the content of the manual with input from industry, academic, and government experts. The editorial board consists of members from across the preclinical translational science spectrum. More than 100 authors from around the world have contributed content to this free resource, which is updated regularly and housed by the National Library of Medicine. The AGM has proven to be a widely used resource for those working in drug discovery. Since 2017, it has received more than 30,000 monthly views by scientists from both public and private sectors from over 130 countries.
AGM eBook Editorial Board
AGM Program Leadership
Sarine Markossian, Editor-in-Chief and Lead
Sarine Markossian is the lead of the Assay Guidance Manual (AGM) Translational Science Resources Program at NCATS. In this role, she serves as the editor-in-chief of the eBook, and manages the program’s training workshops. Markossian also leads and collaborates on research projects focused on eliminating bottlenecks in preclinical translational science and establishing best practices for preclinical research.
Abigail Grossman, Managing Editor
Abigail Grossman is the managing editor of the AGM and manages the logistics for AGM events. She has a dual role as a project lead in NCATS’ Information Technology Resources Branch.
Hannah Baskir, Associate Editor
Hannah Baskir is a Scientific Program Manager for the AGM Program. She serves as an Associate Editor of the AGM eBook, assisting with the editorial process, and provides support for workshops, webinars, collaborative research, and other AGM projects.
Kyle Brimacombe, Project Manager, ETB
Kyle Brimacombe is a scientific program manager in the Early Translation Branch (ETB) at NCATS. He serves as an associate editor for the AGM eBook, providing graphic design support, editorial assistance and administrative guidance.
Matthew D. Hall, Scientific Director, NCATS
Matthew D. Hall, Ph.D., is the scientific director of NCATS and a senior scientist in the Early Translation Branch (ETB) within the center’s Division of Preclinical Innovation. In his role as the scientific director, he leads the center’s intramural research and related initiatives.
Associate Editors
PHOTO | NAME | AFFILIATION | LOCATION | AREAS OF EXPERTISE |
---|---|---|---|---|
Michelle Arkin, Ph.D. | University of California, San Francisco | San Francisco, CA | protein-protein interactions; molecular glues; high-throughput screening; fragment-based drug discovery | |
Douglas Auld, Ph.D. | Novartis Institutes for Biomedical Research | Cambridge, MA | high-throughput screening; assay development; open science | |
Christopher Austin, M.D. | Vesalius Therapeutics and Flagship Pioneering | Cambridge, MA | drug development and commercialization; human genetics as applied to target identification; translational science | |
Jonathan Baell, Ph.D. | Lyterian Therapeutics | San Francisco, CA | ||
Thomas D.Y. Chung, Ph.D. | Sanford Burnham Prebys Medical Discovery Institute | La Jolla, CA | lab automation; assay development; development & positioning of drug discovery technologies; strategic alliance management; lead discovery operations | |
Nathan P. Coussens, Ph.D. | Frederick National Laboratory for Cancer Research | Frederick, MD | assay development; high-throughput screening; molecular pharmacology; enzymology; cell-based assays; 3D cell culture models | |
Jayme L. Dahlin, M.D., Ph.D. | Agios Pharmaceuticals | Washington, DC | chemical biology; assay interferences; clinical pathology; high-throughput screening; assay development and validation | |
Viswanath Devanarayan, Ph.D. | Eisai Inc., and University of Illinois Chicago | Souderton, PA | machine learning; statistics; biomarkers | |
Timothy L. Foley, Ph.D. | Pfizer Inc. | Groton, CT | mechanistic pharmacology; enzymology; chemical biology DNA-encoded libraries; high-throughput screening | |
Marcie Glicksman, Ph.D. | EnClear Therapies | Salem, MA | cell biology; assay development; high-throughput screening; preclinical animal models; iPSC differentiation and cell therapy; devices | |
Kirill Gorshkov, Ph.D. | Bristol Myers Squibb | Lawrenceville, NJ | cell-based assays; high-content screening; high-throughput screening; pharmacology; assay development | |
Samuel Hoare, Ph.D. | Pharmechanics, LLC | Owego, NY | pharmacology; kinetics; data analysis; development & positioning of drug discovery technologies; cell-based assays | |
James Inglese, Ph.D. | NCATS and National Human Genome Research Institute, National Institutes of Health (NIH) | Rockville, MD | chemical biology; molecular pharmacology; assay development; high- throughput screening | |
Philip W. Iversen, Ph.D. | Luther College | Decorah, IA | statistics; assay validation; preclinical drug combination studies | |
Madhu Lal‑Nag | InSphero AG | |||
Zhuyin Li, Ph.D. | Bristol Myers Squibb | Princeton, NJ | high-throughput screening; phenotypic screening; high content screening; preclinical biomarker identification | |
Jason R. Manro, M.S. | Eli Lilly and Company | Indianapolis, IN | Preclinical Statistics; In Vitro and In Vivo Assay Design, Optimization, Validation, and Analysis; Reproducibility and Quality Control; 3Rs. | |
James McGee, Ph.D. | Eli Lilly and Company | Indianapolis, IN | high throughput mass spec | |
Owen McManus, Ph.D. | Quiver Bioscience | Cambridge, MA | ion channels; drug discovery; electrophysiology; phenotypic screening | |
Mackenzie Pearson, Ph.D. | Eli Lilly and Company | Indianapolis, IN | mass spectrometry based high-throughput screening techniques; lipidomic analysis via LC-MS/MS; small molecule and metabolite LC-MS/MS and GC-TOF analysis | |
Terry Riss, Ph.D. | Promega Corporation | Fitchburg, WI | cell biology; cell-based assay development; 3D culture models; high-throughput screening | |
Peter Saradjian, J.D. | Beth Israel Deaconess Medical Center | Boston, MA | antibody therapeutics; small molecule high-throughput screening; robotic automation | |
Michael A. Tarselli, Ph.D. M.B.A. | TetraScience | Boston, MA | cloud data management; external collaboration; high-throughput screening; scientific informatics; machine learning | |
O. Joseph Trask, Jr., B.S. | Revvity, Inc | Research Triangle Park, NC | cellular assay development; basic and complex cell models (2D, 3D, 4D); high content screening; microscopy; flow cytometry; high-throughput screening | |
Jeffrey R. Weidner, Ph.D. | QualSci Consulting, LLC | Carmel, IN | drug discovery; SAR; high throughput screening; bench and integrated in vitro assay automation; in vitro informatics; assay development; ezzymology; assay validation and quality control; process improvement; data science; Six Sigma Blackbelt | |
Mary Jo Wildey, Ph.D. | Merck & Co., Inc. | Kenilworth, NJ, | high-throughput screening; bench and integrated in vitro assay automation; in vitro informatics | |
Kelli Wilson, Ph.D. | NCATS, NIH | Rockville, MD | TI/TV; advanced assay technologies; assay development and validation; reproducibility and replication concepts; drug repurposing | |
Menghang Xia, Ph.D. | NCATS, NIH | Rockville, MD | in vitro toxicology; pharmacology; assay development; high-throughput screening; high-content screening | |
Xin Xu, Ph.D. | NCATS, NIH | Rockville, MD | pharmacokinetics; absorption, distribution, metabolism and excretion studies; drug discovery and development |